CDS
| Accession Number | TCMCG006C28555 |
| gbkey | CDS |
| Protein Id | XP_022548085.1 |
| Location | complement(join(5975500..5975664,5975754..5975933,5977265..5977411,5977521..5977571,5977647..5977721,5977818..5977925,5978035..5978082,5978165..5978326,5978406..5978506,5978595..5978742,5978827..5978988,5979090..5979207,5979297..5979421,5979556..5979795,5979894..5980034,5980156..5980311,5980403..5980651,5980742..5980986,5981064..5981177,5981266..5981549,5981683..5981764,5981865..5982002,5982102..5982219,5982324..5982626,5982716..5982911,5982999..5983474,5983560..5983666,5983757..5983835,5983916..5984071)) |
| Gene | LOC106357027 |
| GeneID | 106357027 |
| Organism | Brassica napus |
Protein
| Length | 1557aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_022692364.1 |
| Definition | uncharacterized protein LOC106357027 [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | tRNA rRNA methyltransferase (SpoU) family protein |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03016 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K15333
[VIEW IN KEGG] |
| EC |
2.1.1.34
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGAGTTCCTCTCTGATTACTTCACTGTCGCTGAGCTTCAAACAAGTTCCTCCAACAGCTGTTCCCGCTTTTCTCGACTGTGTCCTAAGCTCCACAGGCGTGTCTCCCTCCTCCCTCTTCGAATCCCTCATCAAAGAGTTGCCTTTTCACGCGGAGGAGAAGAAGTTTGATTCTGATGATTGCAACCACATTGCTTCGTTGGTGGCTGGTCTTTGTCATCTACTAAAGAGTTCTGGGTTTGGTAATGAGGATAATCATAATGCGTTGCAGTTGTTTGTGTGGAGAGTGTTTATTCCACTTATGAAGATGGTTCGTGCTTATGACTTGGATATGCTTAATAAGATAATACAATCGTTCTTTGATGTTGTGGTCGAGACTAGTGCATTGGATATATTGAGAGTGAGTTTGGTGCCTTTTCTACTGAGATCAGTTGGGGTTTCGATGGGAATGCTTCAACATGAAGAATCGGATTTCATCAGGTGGGGAGAGCTGTTGCTTGGTGGCTCTTTGGATATAAATGATAAGGATGGAAACTACGTTGGATCTTTGTCTGAGTCATTTCCGATTCCACTGTCGTGCCATCTTTTGAATCTGATTCTGAACGCTGCTTTTCAAAGTCACCAAGAAGCTCCAGAGGCTGAGGATTTTGCAGCTGGTTTGCTTTGGGATTTGTGTAATACTACTGAGAGGCTTTTGTCTCAAAGTGTGGAGCATCGTTCGTGTGCTGTTAGTTTCCTCCTCCCTGCTGTTTTCAAGGTGTTTTCAGCTCAGTCTTCTCTGAAGATTTCACTTAAAGGGAATGTGTACATACTTTCAAGGAATGGCTTCAAGAAAAGGATTTGGGAATGCTGCAAGAAGCTGTTCTCGGTTGGATCAATAGAGAGAAGGGATGCTTACAGTGTTCTCTCTTTGTGTCTTTCTTCTGATGGAGCCCTAAGTTATGTCTCAGAAAAAGACCCTGTCGATTTTGACTTTAGGTCTCAAGAGTTTTGGGAAGAAATCAAAAAAGGCTTGGTTTTTGATGAGAGCTTAGTAAGGAAGCAGTCATTGCATATACTGAAATCAGTTTTATCCATAAGCGAAGTGAGTAAGACGAGTTCTGAGAAGAAGCCGGAAGGGAACTCAGTTCATCGTGCTTTGACGAAAAAGGAGATGTGGGCAGAAAAGGAAGCCAAGTCACTTGGTGTGGGAGAATTGTATGGCTCTGTTGAATCTGCTTTGACTAGTCAGCAGCAGCAGTGGCAAGCTTTTGTGCTCTTGTATGAGATGCTTGACGAGTACGGCACTCATCTCGTAGAAGCAGTGTGGAGTAACCAGATTGATTTGTTAATCAAATCATCGTTCAGATATGAAGAAACTCCAGATGAGGAAACTGAAATATTTAATTGGTTAGAGGTTCTTTGGAATCGAGGCTTTCGTCATGATAATCCTCTAGTCAGGTGCACGGTCATGGAGTCTTTTATGGGGATTGAGTGGAGAAGATACAAAACGTGTACACAATCAATGTCCCAAACTTTCGTTCTTGGGCCTTTCATAGAGGCTTTGAATGATTCTGTACACCACAAGGACTTCGGGCTGAAAAGAATCTATACCTCAAGAACAATTGAAGGTGCAACTCAATATGTGTGTGCGTACACAAGTTGCCTCAACCCAAGGAATCGGATTGGATTTTTGATCAACTTGGCATCTCTTGCAAAGAAACAGTCTTTTGGTAGGGCTGGATTTATGGCTTTGGTACAATGCATTGTTTCTACAGCATATGTGGTTGGAGGATACGGGAACAAGGAGATGAAGCATCTTGAAAATGGATTCTCTGGGACTCCTCTAGAACCTTCTAGTGAACATTTAAGCCAAGATGAGATGTCACATATACTGGATGTCTTGAAGTTTGTTGCAGAGAGCAGCAGGCAACATTTTAATCACAAATACCGTACTCGAGTTTGCCAAAAAGTGTTGGAAACTGCTGCTTCAGTGGTGAACCCTTGTGAAGTTCCTCTTGGAACACTATTGCAGTTTGTTTCAGCAATTCCTCGGGAGTTTACTGACCATAATGGTTCATTGCGGAAAACGATGCTAGAATGGCTCCAGGGGTGCAACAGAAACACTTCCGACAGTTTATGTACTGATGGCACTCGTCTTGTAGCGAGCCTTCACGAGTATCTGAAAGAATTTGTCAGTGATCATGTTGAGGGTTTTGATGATGAAGACTTGGAAGCATGGGAATCCCAAACAAAACGATGGGCAAGAGTATTTTTCCTTACAGTTAATGATGAAGAACATCTCGCCGATATCATAATGTTTGTGCAAAATAGCGGCGTTAGTTTTTTCCAAGAGAAGAACCATTTAGAACGAGCACCTGCGAAGTTTTTAATCTTTATTTTGAGTATGCTCTTAGAGCTCCAGAACATGCAAGATGGAGTCTCTGAACTTAGTTCTTCGGTGAAAAGCAAGTCATGCATTGGCATTGTTGAGGAAAATGGCAAGCAGATTGTTGGCAGCGCTTCAGTTATTAATGAAAAGTTTGCTGCTGTTCTCTTATCGATACTGAAGCAGCTGGTTTCATTTGCTGATTCATCTTGCTCAATATTCTGGTCTCACACTACTGTGGAGAATGGTGTTCTGTCTGGTTCTATCATAGGAAAACTAGGGGGTCCAAGTCAACGCCGACTATCTGTTCCTACTACAACAGCTGTACTAGAAGCTGTAACATCGGTGAAAATTATTGGGTTGATCTCGTCATACTGTGGTCAAGTAACTAGTGGTGTTACTGAACTCAAATTAGCATTGGCTTTCTTTTGGAAGTTCGTCCAGCATACGCTATCATCTCAAAATTGTAATTCTGAGGCTGAAGCTGAGATCTATCTTGCAGCATTTGAAACGCTAGCTGCTGTACTGAATGCAGTTTTGTCCTTGTGCTCAGCTAGAGCTTTCAACCTTCTAGAAAACGATAATACATTATTAGCTACGGTGGATGGTGAATATTGGTTACAAGCTTCAGTTCCGGATTTCCTCCACAACATTAACCATCTTCTCACAGCAGGACTTCTGGCAAGAAGTAGAAGGGCTGTTCTGCTTAGCTGGAAGTGGCTTTGTGTGGAGTCTCTATTATCAGTCATGAATGTTCTTGATGTCAGACGTATTCCAGGAGATATAACTTCTTTCTTCTCAGATGATACAGTCAAAAGCATATTTTATGATATTGTAGAGAGCCTTGAAAATGCTGGGGAGGGTTCTGCTTTGCCTATGCTGAAATCTGTCAGACTTGCTTTGGGGATACTTGCGTCTGGGAAATCATCTTTGGATGGTTTCTCGGGTGTGGATACTCAGACGATGTGGCAGCTGGTCAAATCATGTTGGATATTGCATATCAGCTGCAAGAAGAGAAGGGTCGCACCCATTGCTGCGTTATTGTCTTCGGTGTTGCATTCTTCTTTGTTTAGTAATAAAGACATGCACGTAGCTGAAGATGGAGATGGACCGCTGAAGTGGTTTGTTGAAAAAGTACTTGAGGAAGGTCAGAAAAGTCCACGCACAATTCGACTTGCGGCCTTGCACCTAACAGGACTGTGGCTCATGTACCCTAGGACGATCAAGTACTACATTAAAGAATTGAAGCTTCTGACTCTCTATGGTTCTGTTGCATTTGATGAGGATTTTGAAGCTGAGTTATCTGACAATAGTGATGCAAGAACTGAAGTATCGTTACTGGCAAAGAACCCAGACCCTGAACTGACAGAAGTTTTTATCAACACGGAGTTGTATGCACGTGTGTCAGTCGCTGGTCTGTTTCAGAAGCTGGCTGATTTGGCCAATATGGCCGAACCAGCATGTCAAAATCAAGATTACCAGGATGCTATTGTGGCTGGAAAGTTGTTTCTATTGGAGCTTCTTGATGCAGCGGTGCATGATAAAGACTTGGCAAAAGAGCTTTACAAGAAGTATAGTGCTATCCATAGACGAAAAATACGCGCGTGGCAGATGATATGCATTATGTCGCGCTTTGTCAGCAATGACATTGTTGGCCAAGTCATGGACAGTGTGCACATTTGCTTATATAGAAATAACCTGCCTGCTGTTCGACAATACCTGGAAACATTTGCCATAAACATTTACCTGAAATTTCCACCATTGGTTAAAGAGCAGTTAGTTCCTATACTGCAAAATTATGACACTAAAGCTCAGCAAGCTCTCTCGTCTTATGTCTTCATTGCAGCCAATGTCATCCTTCATGCCGAAAAGATGGCTCAACAGACAAATTTGAGAGAACTTCTTCCACCAATAATTCCGTTATTAACTTCTCATCATCATAGCTTACGAGGTTTCACTCAGTTTTCTCTTTCTCGGTTCTGCAGCGTGACTGCTGAGAAATGGGTTCCAATCGTCGAAGTCCCGGTGAACAGTTTGAAACTGTTCTTGGAGAAAAAGAAAAGAGAAGGCTTCTCAATCTTGGGACTGGAGCAGACAGCTAACAGTGTTTCTCTGGACAAATATAAGTTCCCAAAGAAGACTGTTTTGGTGCTGGGTCGGGAAAAGGAAGGCATACCTGTGGATATAATCCATGTACTGGACGCTTGCGTCGAGATCCCACAACTAGGAGTTGTTAGGTCCCTCAACGTCCACGTCAGCGGCGCCATTGCTCTCTGGGAATACACTCGCCAACAACGCATTCAATAG |
| Protein: MSSSLITSLSLSFKQVPPTAVPAFLDCVLSSTGVSPSSLFESLIKELPFHAEEKKFDSDDCNHIASLVAGLCHLLKSSGFGNEDNHNALQLFVWRVFIPLMKMVRAYDLDMLNKIIQSFFDVVVETSALDILRVSLVPFLLRSVGVSMGMLQHEESDFIRWGELLLGGSLDINDKDGNYVGSLSESFPIPLSCHLLNLILNAAFQSHQEAPEAEDFAAGLLWDLCNTTERLLSQSVEHRSCAVSFLLPAVFKVFSAQSSLKISLKGNVYILSRNGFKKRIWECCKKLFSVGSIERRDAYSVLSLCLSSDGALSYVSEKDPVDFDFRSQEFWEEIKKGLVFDESLVRKQSLHILKSVLSISEVSKTSSEKKPEGNSVHRALTKKEMWAEKEAKSLGVGELYGSVESALTSQQQQWQAFVLLYEMLDEYGTHLVEAVWSNQIDLLIKSSFRYEETPDEETEIFNWLEVLWNRGFRHDNPLVRCTVMESFMGIEWRRYKTCTQSMSQTFVLGPFIEALNDSVHHKDFGLKRIYTSRTIEGATQYVCAYTSCLNPRNRIGFLINLASLAKKQSFGRAGFMALVQCIVSTAYVVGGYGNKEMKHLENGFSGTPLEPSSEHLSQDEMSHILDVLKFVAESSRQHFNHKYRTRVCQKVLETAASVVNPCEVPLGTLLQFVSAIPREFTDHNGSLRKTMLEWLQGCNRNTSDSLCTDGTRLVASLHEYLKEFVSDHVEGFDDEDLEAWESQTKRWARVFFLTVNDEEHLADIIMFVQNSGVSFFQEKNHLERAPAKFLIFILSMLLELQNMQDGVSELSSSVKSKSCIGIVEENGKQIVGSASVINEKFAAVLLSILKQLVSFADSSCSIFWSHTTVENGVLSGSIIGKLGGPSQRRLSVPTTTAVLEAVTSVKIIGLISSYCGQVTSGVTELKLALAFFWKFVQHTLSSQNCNSEAEAEIYLAAFETLAAVLNAVLSLCSARAFNLLENDNTLLATVDGEYWLQASVPDFLHNINHLLTAGLLARSRRAVLLSWKWLCVESLLSVMNVLDVRRIPGDITSFFSDDTVKSIFYDIVESLENAGEGSALPMLKSVRLALGILASGKSSLDGFSGVDTQTMWQLVKSCWILHISCKKRRVAPIAALLSSVLHSSLFSNKDMHVAEDGDGPLKWFVEKVLEEGQKSPRTIRLAALHLTGLWLMYPRTIKYYIKELKLLTLYGSVAFDEDFEAELSDNSDARTEVSLLAKNPDPELTEVFINTELYARVSVAGLFQKLADLANMAEPACQNQDYQDAIVAGKLFLLELLDAAVHDKDLAKELYKKYSAIHRRKIRAWQMICIMSRFVSNDIVGQVMDSVHICLYRNNLPAVRQYLETFAINIYLKFPPLVKEQLVPILQNYDTKAQQALSSYVFIAANVILHAEKMAQQTNLRELLPPIIPLLTSHHHSLRGFTQFSLSRFCSVTAEKWVPIVEVPVNSLKLFLEKKKREGFSILGLEQTANSVSLDKYKFPKKTVLVLGREKEGIPVDIIHVLDACVEIPQLGVVRSLNVHVSGAIALWEYTRQQRIQ |